BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB035G07LP1|AL430112
(968 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1380 1902 0.0
>3x_Contig1380
Length = 6718
Score = 1902 bits (959), Expect = 0.0
Identities = 967/969 (99%), Gaps = 1/969 (0%)
Strand = Plus / Minus
Query: 1 gccgcttcttggatgtttcaaatgtgaatcattctcctttggcgtataaaactccagaga 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6203 gccgcttcttggatgtttcaaatgtgaatcattctcctttggcgtataaaactccagaga 6144
Query: 61 gaaatatcctaaagtcacctttacagcagcccataaaatatcatggagtgagcagcttac 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6143 gaaatatcctaaagtcacctttacagcagcccataaaatatcatggagtgagcagcttac 6084
Query: 121 tcgataatgacatccaagggacgatgaaaaatctatattatatagatgaaaccgacgagg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6083 tcgataatgacatccaagggacgatgaaaaatctatattatatagatgaaaccgacgagg 6024
Query: 181 ataggtttcttgaaaattctgctgaatcagaagagtactatttggatgaaataaatggga 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6023 ataggtttcttgaaaattctgctgaatcagaagagtactatttggatgaaataaatggga 5964
Query: 241 taccggaggattttgaattttcggacgatgaaaatattatgcggaatctttcacctttaa 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5963 taccggaggattttgaattttcggacgatgaaaatattatgcggaatctttcacctttaa 5904
Query: 301 gtaggttgaatcgaacaaaacttttagcctttagaaggacacatagctattctgaccggc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5903 gtaggttgaatcgaacaaaacttttagcctttagaaggacacatagctattctgaccggc 5844
Query: 361 cactgggtgtattgaaagataacactcctcttaattacaagttggaaataaaaaataaaa 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5843 cactgggtgtattgaaagataacactcctcttaattacaagttggaaataaaaaataaaa 5784
Query: 421 cagtcacattttttgatcataattcaattcataggtcatattctgaacctttcagttcat 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5783 cagtcacattttttgatcataattcaattcataggtcatattctgaacctttcagttcat 5724
Query: 481 cattactccatgattcccgaaagtctgaagataattgcgaggaccgaatactcgataaca 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5723 cattactccatgattcccgaaagtctgaagataattgcgaggaccgaatactcgataaca 5664
Query: 541 aaactcttgcttcacctgttacccccaacagctcattcacgaagccttctccaagcttta 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5663 aaactcttgcttcacctgttacccccaacagctcattcacgaagccttctccaagcttta 5604
Query: 601 cacagaattcttccctcagcccaattcaggaatctacgacctcatcagacgcatctccca 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5603 cacagaattcttccctcagcccaattcaggaatctacgacctcatcagacgcatctccca 5544
Query: 661 agatattataaacaggacatttaaaaagacaatctgtaatattacataccgtaccatctc 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5543 agatattataaacaggacatttaaaaagacaatctgtaatattacataccgtaccatctc 5484
Query: 721 atagccggatattaactaactagaataatatatatgttattgtgttagtgttgtatcccc 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5483 atagccggatattaactaactagaataatatatatgttattgtgttagtgttgtatcccc 5424
Query: 781 tgtattctctccatatatcttctctgcttttcaggagacattttattatggcg-mgtgca 839
||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 5423 tgtattctctccatatatcttctctgcttttcaggagacattttattatggcgcagtgca 5364
Query: 840 ttcttttgtccattgagcaaaggtcgtgggagtggtggcaaggattttgacttagatata 899
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5363 ttcttttgtccattgagcaaaggtcgtgggagtggtggcaaggattttgacttagatata 5304
Query: 900 gttcccggttcctttttattgtttgaagttagctcaagtattaagcccttgagttcttct 959
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5303 gttcccggttcctttttattgtttgaagttagctcaagtattaagcccttgagttcttct 5244
Query: 960 gctgtctgt 968
|||||||||
Sbjct: 5243 gctgtctgt 5235
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 7950
Number of Sequences: 1807
Number of extensions: 7950
Number of successful extensions: 41
Number of sequences better than 1.0e-20: 1
length of query: 968
length of database: 10,358,551
effective HSP length: 16
effective length of query: 952
effective length of database: 10,329,639
effective search space: 9833816328
effective search space used: 9833816328
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.7 bits)